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biocontainers/micro-sam:1.1.1_cv1

Manifest digest

sha256:e6d0f8aedb7ba9213b13e92b5f4da2f9450eb7547e67fdbb30af81723e48328d

OS/ARCH

linux/amd64

Compressed size

1.49 GB

Last pushed

over 1 year by biocontainersci

Type

Image

Manifest digest

sha256:e6d0f8aedb7ba9213b13e92b5f4da2f9450eb7547e67fdbb30af81723e48328d

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=24.040 B
5ADD file ... in / 28.37 MB
6CMD ["/bin/bash"]0 B
7ENV LANG=C.UTF-8 LC_ALL=C.UTF-80 B
8ENV ENV_NAME=base0 B
9ENV MAMBA_ROOT_PREFIX=/opt/conda0 B
10ENV MAMBA_EXE=/bin/micromamba0 B
11COPY /etc/ssl/certs/ca-certificates.crt /etc/ssl/certs/ca-certificates.crt # buildkit123.59 KB
12COPY /tmp/bin/micromamba /bin/micromamba # buildkit5.91 MB
13RUN /bin/sh -c { grep32 B
14ARG MAMBA_USER=mambauser0 B
15ARG MAMBA_USER_ID=574390 B
16ARG MAMBA_USER_GID=574390 B
17ENV MAMBA_USER=mambauser0 B
18ENV MAMBA_USER_ID=574390 B
19ENV MAMBA_USER_GID=574390 B
20COPY _dockerfile_initialize_user_accounts.sh /usr/local/bin/_dockerfile_initialize_user_accounts.sh # buildkit524 B
21COPY _dockerfile_setup_root_prefix.sh /usr/local/bin/_dockerfile_setup_root_prefix.sh # buildkit284 B
22RUN |3 MAMBA_USER=mambauser MAMBA_USER_ID=57439 MAMBA_USER_GID=574393.98 KB
23USER mambauser0 B
24WORKDIR /tmp32 B
25COPY _apptainer_shell.sh /usr/local/bin/_apptainer_shell.sh # buildkit217 B
26COPY _entrypoint.sh /usr/local/bin/_entrypoint.sh # buildkit686 B
27COPY _activate_current_env.sh /usr/local/bin/_activate_current_env.sh # buildkit648 B
28ENTRYPOINT ["/usr/local/bin/_entrypoint.sh"]0 B
29CMD ["/bin/bash"]0 B
30COPY _dockerfile_shell.sh /usr/local/bin/_dockerfile_shell.sh # buildkit346 B
31SHELL [/usr/local/bin/_dockerfile_shell.sh]0 B
32/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL base.image=mambaorg/micromamba:1.5.10-noble0 B
33/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL version=10 B
34/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL software=micro-sam0 B
35/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL software.version=1.1.10 B
36/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL about.summary=Tools0 B
37/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL about.home=https://github.com/computational-cell-analytics/micro-sam0 B
38/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL about.documentation=https://computational-cell-analytics.github.io/micro-sam/micro_sam.html0 B
39/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL about.license=MIT0 B
40/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL about.license_file=https://github.com/computational-cell-analytics/micro-sam/blob/master/LICENSE0 B
41/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL about.tags=Bioinformatics,0 B
42/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL maintainer=Anwai0 B
43/usr/local/bin/_dockerfile_shell.sh #(nop) LABEL maintainer=Carolin0 B
44/usr/local/bin/_dockerfile_shell.sh #(nop) COPY --chown=mambauser:mambauserfile:1b0635c4247fd73cb1d2877d486c1d85d5123f214a9d5f11fda15baf166e080e in425 B
45/usr/local/bin/_dockerfile_shell.sh micromamba install -y -n1.45 GB
46/usr/local/bin/_dockerfile_shell.sh #(nop) ENV PATH=/opt/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
47/usr/local/bin/_dockerfile_shell.sh #(nop) USER root0 B
48/usr/local/bin/_dockerfile_shell.sh pip install git+https://github.com/computational-cell-analytics/micro-sam.git@9b055c31.89 MB

Command

 ARG RELEASE