chrisamiller/phlat:with_index

Manifest digest

sha256:9ffefeb50e842afdc61fead705f1ed781f0fa5022f5441686f8bac8746495c89

OS/ARCH

linux/amd64

Compressed size

4.2 GB

Last pushed

over 6 years by chrisamiller

Type

Image

Manifest digest

sha256:9ffefeb50e842afdc61fead705f1ed781f0fa5022f5441686f8bac8746495c89

Image Layers

Image Layers

1ADD file ... in / 30.87 MB

2/bin/sh -c set -xe &&847 B

3/bin/sh -c rm -rf /var/lib/apt/lists/*516 B

4/bin/sh -c mkdir -p /run/systemd163 B

5CMD ["/bin/bash"]0 B

6MAINTAINER Magdalena Arnal <[email protected]>0 B

7/bin/sh -c apt-get update &&128.75 MB

8WORKDIR /tmp0 B

9/bin/sh -c git clone https://github.com/BenLangmead/bowtie2.git159.43 MB

10WORKDIR /tmp/bowtie20 B

11/bin/sh -c git checkout v2.2.4658.31 KB

12/bin/sh -c sed -i 's/ifneq3.3 KB

13/bin/sh -c sed -i 's/RELEASE_FLAGS3.3 KB

14/bin/sh -c make11.9 MB

15/bin/sh -c cp -p bowtie211.91 MB

16/bin/sh -c apt-get update -y223.41 MB

17WORKDIR /bin0 B

18/bin/sh -c wget http://github.com/samtools/samtools/releases/download/1.5/samtools-1.5.tar.bz23.97 MB

19/bin/sh -c tar --bzip2 -xf4.93 MB

20WORKDIR /bin/samtools-1.50 B

21/bin/sh -c ./configure29.55 KB

22/bin/sh -c make12.32 MB

23/bin/sh -c rm /bin/samtools-1.5.tar.bz2142 B

24ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/bin/samtools-1.50 B

25/bin/sh -c rm -rf /tmp/bowtie2129 B

26/bin/sh -c apt-get clean336 B

27/bin/sh -c apt-get remove --yes422.12 KB

28WORKDIR /0 B

29/bin/sh -c apt-get update -y47.38 MB

30/bin/sh -c pip install pysam==0.8.412.54 MB

31/bin/sh -c pip install gdown;1.65 MB

32WORKDIR /opt/0 B

33/bin/sh -c gdown -O phlat-release-1.1_Ubuntu.tar.gz1.1 MB

34/bin/sh -c gdown -O b2folder.tar.gz3.56 GB

Command

ADD file:529264c6593975a61f31e017eaf2e33d9ef126bde387f5d4136c60cf010a7383 in /