ctomlins/cramify:latest

Index digest

sha256:529b9ce2041a4f59771e0d1334e5ea40ec971280743e088308036f61541dda23

OS/ARCH

linux/amd64

Compressed size

275.89 MB

Last pushed

12 months by ctomlins

Type

Image

Manifest digest

sha256:4a1d24869bfc50de76c8d8887436c4fdeda52fcd9737531d14e1434d36a96f12

Image Layers

1ARG RELEASE0 B

2ARG LAUNCHPAD_BUILD_ARCH0 B

3LABEL org.opencontainers.image.ref.name=ubuntu0 B

4LABEL org.opencontainers.image.version=20.040 B

5ADD file ... in / 26.24 MB

6CMD ["/bin/bash"]0 B

7LABEL maintainer=Chad Tomlinson <[email protected]> description=Ubuntu0 B

8ENV DEBIAN_FRONTEND=noninteractive LC_ALL=C.UTF-8 LANG=C.UTF-80 B

9ARG HTSLIB_VER=1.22.10 B

10ARG SAMTOOLS_VER=1.22.10 B

11ARG BCFTOOLS_VER=1.220 B

12ARG HTSLIB_URL=https://github.com/samtools/htslib/releases/download/1.22.1/htslib-1.22.1.tar.bz20 B

13ARG SAMTOOLS_URL=https://github.com/samtools/samtools/releases/download/1.22.1/samtools-1.22.1.tar.bz20 B

14ARG BCFTOOLS_URL=https://github.com/samtools/bcftools/releases/download/1.22/bcftools-1.22.tar.bz20 B

15RUN |6 HTSLIB_VER=1.22.1 SAMTOOLS_VER=1.22.1 BCFTOOLS_VER=1.22103.44 MB

16WORKDIR /tmp/build119 B

17RUN |6 HTSLIB_VER=1.22.1 SAMTOOLS_VER=1.22.1 BCFTOOLS_VER=1.2292.23 MB

18RUN |6 HTSLIB_VER=1.22.1 SAMTOOLS_VER=1.22.1 BCFTOOLS_VER=1.2226.48 MB

19RUN |6 HTSLIB_VER=1.22.1 SAMTOOLS_VER=1.22.1 BCFTOOLS_VER=1.2227.49 MB

20RUN |6 HTSLIB_VER=1.22.1 SAMTOOLS_VER=1.22.1 BCFTOOLS_VER=1.224.64 KB

21RUN |6 HTSLIB_VER=1.22.1 SAMTOOLS_VER=1.22.1 BCFTOOLS_VER=1.2232 B

22WORKDIR /work94 B

23COPY cramify_one.sh /usr/local/bin/cramify_one.sh # buildkit2.29 KB

24RUN |6 HTSLIB_VER=1.22.1 SAMTOOLS_VER=1.22.1 BCFTOOLS_VER=1.222.29 KB

25ENV UMASK=0002 CRAM_VERSION=3.1 CRAM_CODEC=zlib CRAM_LEVEL=60 B

26CMD ["/bin/bash"]0 B

Command

 ARG RELEASE