Sign inSign up

databio/rpipe:0.2.7

Manifest digest

sha256:04257fc07483a5981923b7fce9a83b0d2b547d31aa489d516d971ea18b33ca2c

OS/ARCH

linux/amd64

Compressed size

3.38 GB

Last pushed

over 4 years by jpsmith5

Type

Image

Manifest digest

sha256:04257fc07483a5981923b7fce9a83b0d2b547d31aa489d516d971ea18b33ca2c

Image Layers

Image Layers

1ADD file ... in / 27.24 MB
2CMD ["bash"]0 B
3LABEL org.opencontainers.image.licenses=GPL-2.0-or-later org.opencontainers.image.source=https://github.com/rocker-org/rocker-versioned2 org.opencontainers.image.vendor=Rocker Project0 B
4ENV R_VERSION=4.1.20 B
5ENV TERM=xterm0 B
6ENV LC_ALL=en_US.UTF-80 B
7ENV LANG=en_US.UTF-80 B
8ENV R_HOME=/usr/local/lib/R0 B
9ENV CRAN=https://packagemanager.rstudio.com/all/__linux__/focal/latest0 B
10ENV TZ=Etc/UTC0 B
11COPY scripts/install_R.sh /rocker_scripts/install_R.sh # buildkit1.86 KB
12RUN /bin/sh -c /rocker_scripts/install_R.sh #282.35 MB
13COPY scripts /rocker_scripts # buildkit22.46 KB
14RUN /bin/sh -c /rocker_scripts/patch_install_command.sh #187 B
15CMD ["R"]0 B
16LABEL org.opencontainers.image.licenses=GPL-2.0-or-later org.opencontainers.image.source=https://github.com/rocker-org/rocker-versioned2 org.opencontainers.image.vendor=Rocker Project0 B
17ENV S6_VERSION=v2.1.0.20 B
18ENV RSTUDIO_VERSION=2021.09.0+3510 B
19ENV DEFAULT_USER=rstudio0 B
20ENV PATH=/usr/lib/rstudio-server/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
21RUN /bin/sh -c /rocker_scripts/install_rstudio.sh #201.76 MB
22RUN /bin/sh -c /rocker_scripts/install_pandoc.sh #25.94 KB
23EXPOSE map[8787/tcp:{}]0 B
24CMD ["/init"]0 B
25ARG BIOCONDUCTOR_VERSION=3.140 B
26ARG BIOCONDUCTOR_PATCH=300 B
27ARG BIOCONDUCTOR_DOCKER_VERSION=3.14.300 B
28LABEL name=bioconductor/bioconductor_docker version=3.14.30 url=https://github.com/Bioconductor/bioconductor_docker vendor=Bioconductor0 B
29RUN |3 BIOCONDUCTOR_VERSION=3.14 BIOCONDUCTOR_PATCH=30 BIOCONDUCTOR_DOCKER_VERSION=3.14.30248 B
30RUN |3 BIOCONDUCTOR_VERSION=3.14 BIOCONDUCTOR_PATCH=30 BIOCONDUCTOR_DOCKER_VERSION=3.14.30212 B
31ENV DEBIAN_FRONTEND=noninteractive0 B
32RUN |3 BIOCONDUCTOR_VERSION=3.14 BIOCONDUCTOR_PATCH=30 BIOCONDUCTOR_DOCKER_VERSION=3.14.30586.99 MB
33RUN |3 BIOCONDUCTOR_VERSION=3.14 BIOCONDUCTOR_PATCH=30 BIOCONDUCTOR_DOCKER_VERSION=3.14.30192.58 MB
34RUN |3 BIOCONDUCTOR_VERSION=3.14 BIOCONDUCTOR_PATCH=30 BIOCONDUCTOR_DOCKER_VERSION=3.14.304.6 MB
35RUN |3 BIOCONDUCTOR_VERSION=3.14 BIOCONDUCTOR_PATCH=30 BIOCONDUCTOR_DOCKER_VERSION=3.14.30269 B
36ADD install.R /tmp/ # buildkit263 B
37RUN |3 BIOCONDUCTOR_VERSION=3.14 BIOCONDUCTOR_PATCH=30 BIOCONDUCTOR_DOCKER_VERSION=3.14.3034.54 MB
38RUN |3 BIOCONDUCTOR_VERSION=3.14 BIOCONDUCTOR_PATCH=30 BIOCONDUCTOR_DOCKER_VERSION=3.14.30342 B
39ENV LIBSBML_CFLAGS=-I/usr/include0 B
40ENV LIBSBML_LIBS=-lsbml0 B
41ENV BIOCONDUCTOR_DOCKER_VERSION=3.14.300 B
42ENV BIOCONDUCTOR_VERSION=3.140 B
43CMD ["/init"]0 B
44MAINTAINER Nathan Sheffield <[email protected]>0 B
45LABEL version=0.2.70 B
46ENV _R_INSTALL_PACKAGES_ELAPSED_TIMEOUT_=00 B
47RUN /bin/sh -c Rscript -e53.49 KB
48RUN /bin/sh -c Rscript -e85.98 KB
49RUN /bin/sh -c Rscript -e411.44 KB
50RUN /bin/sh -c Rscript -e8.99 MB
51RUN /bin/sh -c Rscript -e319.82 KB
52RUN /bin/sh -c Rscript -e23.61 MB
53RUN /bin/sh -c Rscript -e13.83 MB
54RUN /bin/sh -c Rscript -e42.72 MB
55RUN /bin/sh -c Rscript -e509.66 KB
56RUN /bin/sh -c Rscript -e49.01 MB
57RUN /bin/sh -c Rscript -e3.45 MB
58RUN /bin/sh -c Rscript -e3.63 MB
59RUN /bin/sh -c Rscript -e292.6 KB
60RUN /bin/sh -c Rscript -e27.06 MB
61RUN /bin/sh -c wget http://big.databio.org/GenomicDistributionsData/GenomicDistributionsData_0.0.2.tar.gz927.59 MB
62RUN /bin/sh -c Rscript -e927.7 MB
63RUN /bin/sh -c git clone62.53 MB
64RUN /bin/sh -c cd peppro730.24 KB
65RUN /bin/sh -c rm -rf96 B
66RUN /bin/sh -c git clone34.47 MB
67RUN /bin/sh -c cd pepatac1.48 MB
68RUN /bin/sh -c rm -rf97 B
69RUN /bin/sh -c echo "R_LIBS=/usr/local/lib/R/host-site-library:\${R_LIBS}"511 B

Command

ADD file:5d68d27cc15a80653c93d3a0b262a28112d47a46326ff5fc2dfbf7fa3b9a0ce8 in /