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filo/freesurfer:latest

Manifest digest

sha256:291ca50648cc349b04af56a871b4901f55f002b4f3e0fde0ce129cece946fd5b

OS/ARCH

linux/amd64

Compressed size

2.7 GB

Last pushed

over 8 years by filo

Type

Image

Manifest digest

sha256:291ca50648cc349b04af56a871b4901f55f002b4f3e0fde0ce129cece946fd5b

Image Layers

Image Layers

1ADD file ... in / 69.68 MB
2/bin/sh -c set -xe &&70.95 KB
3/bin/sh -c rm -rf /var/lib/apt/lists/*630 B
4/bin/sh -c sed -i 's/^#\s*\(deb.*universe\)$/\1/g'853 B
5/bin/sh -c mkdir -p /run/systemd163 B
6CMD ["/bin/bash"]0 B
7/bin/sh -c apt-get update 22.36 MB
8/bin/sh -c wget -qO- https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/6.0.1/freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1.tar.gz2.43 GB
9/bin/sh -c apt-get install -y190 B
10/bin/sh -c apt-get install -y73.14 MB
11/bin/sh -c pip3 install nibabel42.84 MB
12/bin/sh -c apt-get install -y7.37 MB
13/bin/sh -c apt-get install -y2.79 MB
14/bin/sh -c apt-get install -y1.22 MB
15/bin/sh -c apt-get install -y806.56 KB
16/bin/sh -c apt-get install -y4.46 MB
17/bin/sh -c apt-get install -y2.97 MB
18/bin/sh -c curl -sL https://deb.nodesource.com/setup_6.x21.07 MB
19/bin/sh -c apt-get install -y14.51 MB
20/bin/sh -c npm install -g7.57 MB
21ENV FSLDIR=/usr/share/fsl/5.00 B
22ENV FSLOUTPUTTYPE=NIFTI_GZ0 B
23ENV PATH=/usr/lib/fsl/5.0:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
24ENV FSLMULTIFILEQUIT=TRUE0 B
25ENV POSSUMDIR=/usr/share/fsl/5.00 B
26ENV LD_LIBRARY_PATH=/usr/lib/fsl/5.0:0 B
27ENV FSLTCLSH=/usr/bin/tclsh0 B
28ENV FSLWISH=/usr/bin/wish0 B
29ENV FSLOUTPUTTYPE=NIFTI_GZ0 B
30ENV OS=Linux0 B
31ENV FS_OVERRIDE=00 B
32ENV FIX_VERTEX_AREA=0 B
33ENV SUBJECTS_DIR=/opt/freesurfer/subjects0 B
34ENV FSF_OUTPUT_FORMAT=nii.gz0 B
35ENV MNI_DIR=/opt/freesurfer/mni0 B
36ENV LOCAL_DIR=/opt/freesurfer/local0 B
37ENV FREESURFER_HOME=/opt/freesurfer0 B
38ENV FSFAST_HOME=/opt/freesurfer/fsfast0 B
39ENV MINC_BIN_DIR=/opt/freesurfer/mni/bin0 B
40ENV MINC_LIB_DIR=/opt/freesurfer/mni/lib0 B
41ENV MNI_DATAPATH=/opt/freesurfer/mni/data0 B
42ENV FMRI_ANALYSIS_DIR=/opt/freesurfer/fsfast0 B
43ENV PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.50 B
44ENV MNI_PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.50 B
45ENV PATH=/opt/freesurfer/bin:/opt/freesurfer/fsfast/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
46ENV PYTHONPATH=0 B
47/bin/sh -c mkdir /scratch96 B
48/bin/sh -c mkdir /local-scratch100 B
49COPY file:b09221626ac5c3959ace2f16410b19a5ba02153c7d4e7d86158b48dc83ee25f6 in /run.py 5.91 KB
50/bin/sh -c chmod +x /run.py5.91 KB
51COPY file:71c2e9c73dc57111dfb140ee8e6c8d27da3b32ba0ef739d8c8398fd4b804535b in /version 106 B
52ENTRYPOINT ["/run.py"]0 B

Command

ADD file:6eca4ad395f3f9986f9edf8cc1cc454f7247e63f18bdd8bdb914537ef55b9c88 in /