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google/deepvariant:deepsomatic-1.10.0-gpu

Integration & delivery
Machine learning & AI
Data science
Manifest digest

sha256:7f201540f3b267099c3f3cdcd4164798b58cca36ee89fd55fc56991cd82f1c31

OS/ARCH

linux/amd64

Compressed size

10.98 GB

Last pushed

7 months by pichuan

Type

Image

Manifest digest

sha256:7f201540f3b267099c3f3cdcd4164798b58cca36ee89fd55fc56991cd82f1c31

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=22.040 B
5ADD file ... in / 29.04 MB
6CMD ["/bin/bash"]0 B
7ENV NVARCH=x86_640 B
8ENV NVIDIA_REQUIRE_CUDA=cuda>=12.3 brand=tesla,driver>=470,driver<471 brand=unknown,driver>=470,driver<471 brand=nvidia,driver>=470,driver<4710 B
9ENV NV_CUDA_CUDART_VERSION=12.3.101-10 B
10ENV NV_CUDA_COMPAT_PACKAGE=cuda-compat-12-30 B
11ARG TARGETARCH0 B
12LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B
13RUN |1 TARGETARCH=amd64 /bin/sh -c4.41 MB
14ENV CUDA_VERSION=12.3.20 B
15RUN |1 TARGETARCH=amd64 /bin/sh -c54.43 MB
16RUN |1 TARGETARCH=amd64 /bin/sh -c185 B
17ENV PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
18ENV LD_LIBRARY_PATH=/usr/local/nvidia/lib:/usr/local/nvidia/lib640 B
19COPY NGC-DL-CONTAINER-LICENSE / # buildkit6.72 KB
20ENV NVIDIA_VISIBLE_DEVICES=all0 B
21ENV NVIDIA_DRIVER_CAPABILITIES=compute,utility0 B
22ENV NV_CUDA_LIB_VERSION=12.3.2-10 B
23ENV NV_NVTX_VERSION=12.3.101-10 B
24ENV NV_LIBNPP_VERSION=12.2.3.2-10 B
25ENV NV_LIBNPP_PACKAGE=libnpp-12-3=12.2.3.2-10 B
26ENV NV_LIBCUSPARSE_VERSION=12.2.0.103-10 B
27ENV NV_LIBCUBLAS_PACKAGE_NAME=libcublas-12-30 B
28ENV NV_LIBCUBLAS_VERSION=12.3.4.1-10 B
29ENV NV_LIBCUBLAS_PACKAGE=libcublas-12-3=12.3.4.1-10 B
30ENV NV_LIBNCCL_PACKAGE_NAME=libnccl20 B
31ENV NV_LIBNCCL_PACKAGE_VERSION=2.20.3-10 B
32ENV NCCL_VERSION=2.20.3-10 B
33ENV NV_LIBNCCL_PACKAGE=libnccl2=2.20.3-1+cuda12.30 B
34ARG TARGETARCH0 B
35LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B
36RUN |1 TARGETARCH=amd64 /bin/sh -c1.2 GB
37RUN |1 TARGETARCH=amd64 /bin/sh -c62.43 KB
38COPY entrypoint.d/ /opt/nvidia/entrypoint.d/ # buildkit1.64 KB
39COPY nvidia_entrypoint.sh /opt/nvidia/ # buildkit1.49 KB
40ENV NVIDIA_PRODUCT_NAME=CUDA0 B
41ENTRYPOINT ["/opt/nvidia/nvidia_entrypoint.sh"]0 B
42ENV NV_CUDA_LIB_VERSION=12.3.2-10 B
43ENV NV_CUDA_CUDART_DEV_VERSION=12.3.101-10 B
44ENV NV_NVML_DEV_VERSION=12.3.101-10 B
45ENV NV_LIBCUSPARSE_DEV_VERSION=12.2.0.103-10 B
46ENV NV_LIBNPP_DEV_VERSION=12.2.3.2-10 B
47ENV NV_LIBNPP_DEV_PACKAGE=libnpp-dev-12-3=12.2.3.2-10 B
48ENV NV_LIBCUBLAS_DEV_VERSION=12.3.4.1-10 B
49ENV NV_LIBCUBLAS_DEV_PACKAGE_NAME=libcublas-dev-12-30 B
50ENV NV_LIBCUBLAS_DEV_PACKAGE=libcublas-dev-12-3=12.3.4.1-10 B
51ENV NV_CUDA_NSIGHT_COMPUTE_VERSION=12.3.2-10 B
52ENV NV_CUDA_NSIGHT_COMPUTE_DEV_PACKAGE=cuda-nsight-compute-12-3=12.3.2-10 B
53ENV NV_NVPROF_VERSION=12.3.101-10 B
54ENV NV_NVPROF_DEV_PACKAGE=cuda-nvprof-12-3=12.3.101-10 B
55ENV NV_LIBNCCL_DEV_PACKAGE_NAME=libnccl-dev0 B
56ENV NV_LIBNCCL_DEV_PACKAGE_VERSION=2.20.3-10 B
57ENV NCCL_VERSION=2.20.3-10 B
58ENV NV_LIBNCCL_DEV_PACKAGE=libnccl-dev=2.20.3-1+cuda12.30 B
59ARG TARGETARCH0 B
60LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B
61RUN |1 TARGETARCH=amd64 /bin/sh -c2.39 GB
62RUN |1 TARGETARCH=amd64 /bin/sh -c86.53 KB
63ENV LIBRARY_PATH=/usr/local/cuda/lib64/stubs0 B
64ENV NV_CUDNN_VERSION=9.0.0.3120 B
65ENV NV_CUDNN_PACKAGE_NAME=libcudnn9-cuda-120 B
66ENV NV_CUDNN_PACKAGE=libcudnn9-cuda-12=9.0.0.312-10 B
67ENV NV_CUDNN_PACKAGE_DEV=libcudnn9-dev-cuda-12=9.0.0.312-10 B
68ARG TARGETARCH0 B
69LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B
70LABEL com.nvidia.cudnn.version=9.0.0.3120 B
71RUN |1 TARGETARCH=amd64 /bin/sh -c644.01 MB
72ARG PYTHON_VERSION=3.100 B
73ENV PYTHON_VERSION=3.100 B
74ENV DV_BIN_PATH=/opt/deepvariant/bin0 B
75RUN |1 PYTHON_VERSION=3.10 /bin/sh -c48.54 MB
76COPY /opt/conda/envs/bio/bin /opt/conda/envs/bio/bin # buildkit5.07 MB
77COPY /opt/conda/envs/bio/lib /opt/conda/envs/bio/lib # buildkit44.95 MB
78RUN |1 PYTHON_VERSION=3.10 /bin/sh -c186 B
79WORKDIR /opt/32 B
80COPY /usr/local/lib/python3.10/dist-packages /usr/local/lib/python3.10/dist-packages # buildkit4.03 GB
81COPY /opt/deepvariant/bazel-bin/licenses.zip . # buildkit21.99 KB
82COPY /opt/deepvariant/bazel-out/k8-opt/bin/deepvariant/make_examples_somatic.zip /opt/deepvariant/bazel-out/k8-opt/bin/deepvariant/call_variants.zip /opt/deepvariant/bazel-out/k8-opt/bin/deepvariant/postprocess_variants.zip /opt/deepvariant/bazel-out/k8-opt/bin/deepvariant/vcf_stats_report.zip65.76 MB
83RUN |1 PYTHON_VERSION=3.10 /bin/sh -c65.76 MB
84COPY /opt/models /opt/models # buildkit2.41 GB
85COPY /opt/smallmodels /opt/smallmodels # buildkit9.51 MB
86ENV TF_USE_LEGACY_KERAS=10 B
87ENV PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/deepvariant/bin:/opt/conda/envs/bio/bin:/opt/deepvariant/bin:/opt/deepvariant/bin/deepsomatic0 B
88WORKDIR /opt/deepvariant32 B
89CMD ["/opt/deepvariant/bin/deepsomatic/run_deepsomatic" "--help"]0 B

Command

 ARG RELEASE