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google/deepvariant:pangenome_aware_deepvariant-sbx-gpu

Integration & delivery
Machine learning & AI
Data science
Manifest digest

sha256:92d64e0a7f39a33226c4b94ed6a427ee4b336e0dbf33bedf7e38177e1b03c7f5

OS/ARCH

linux/amd64

Compressed size

10.15 GB

Last pushed

about 1 year by pichuan

Type

Image

Manifest digest

sha256:92d64e0a7f39a33226c4b94ed6a427ee4b336e0dbf33bedf7e38177e1b03c7f5

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=22.040 B
5ADD file ... in / 29.03 MB
6CMD ["/bin/bash"]0 B
7ENV NVARCH=x86_640 B
8ENV NVIDIA_REQUIRE_CUDA=cuda>=11.8 brand=tesla,driver>=470,driver<471 brand=unknown,driver>=470,driver<471 brand=nvidia,driver>=470,driver<4710 B
9ENV NV_CUDA_CUDART_VERSION=11.8.89-10 B
10ENV NV_CUDA_COMPAT_PACKAGE=cuda-compat-11-80 B
11ARG TARGETARCH0 B
12LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B
13RUN |1 TARGETARCH=amd64 /bin/sh -c4.41 MB
14ENV CUDA_VERSION=11.8.00 B
15RUN |1 TARGETARCH=amd64 /bin/sh -c53.62 MB
16RUN |1 TARGETARCH=amd64 /bin/sh -c188 B
17ENV PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
18ENV LD_LIBRARY_PATH=/usr/local/nvidia/lib:/usr/local/nvidia/lib640 B
19COPY NGC-DL-CONTAINER-LICENSE / # buildkit6.72 KB
20ENV NVIDIA_VISIBLE_DEVICES=all0 B
21ENV NVIDIA_DRIVER_CAPABILITIES=compute,utility0 B
22ENV NV_CUDA_LIB_VERSION=11.8.0-10 B
23ENV NV_NVTX_VERSION=11.8.86-10 B
24ENV NV_LIBNPP_VERSION=11.8.0.86-10 B
25ENV NV_LIBNPP_PACKAGE=libnpp-11-8=11.8.0.86-10 B
26ENV NV_LIBCUSPARSE_VERSION=11.7.5.86-10 B
27ENV NV_LIBCUBLAS_PACKAGE_NAME=libcublas-11-80 B
28ENV NV_LIBCUBLAS_VERSION=11.11.3.6-10 B
29ENV NV_LIBCUBLAS_PACKAGE=libcublas-11-8=11.11.3.6-10 B
30ENV NV_LIBNCCL_PACKAGE_NAME=libnccl20 B
31ENV NV_LIBNCCL_PACKAGE_VERSION=2.15.5-10 B
32ENV NCCL_VERSION=2.15.5-10 B
33ENV NV_LIBNCCL_PACKAGE=libnccl2=2.15.5-1+cuda11.80 B
34ARG TARGETARCH0 B
35LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B
36RUN |1 TARGETARCH=amd64 /bin/sh -c1.28 GB
37RUN |1 TARGETARCH=amd64 /bin/sh -c62.2 KB
38COPY entrypoint.d/ /opt/nvidia/entrypoint.d/ # buildkit1.65 KB
39COPY nvidia_entrypoint.sh /opt/nvidia/ # buildkit1.49 KB
40ENV NVIDIA_PRODUCT_NAME=CUDA0 B
41ENTRYPOINT ["/opt/nvidia/nvidia_entrypoint.sh"]0 B
42ENV NV_CUDA_LIB_VERSION=11.8.0-10 B
43ENV NV_CUDA_CUDART_DEV_VERSION=11.8.89-10 B
44ENV NV_NVML_DEV_VERSION=11.8.86-10 B
45ENV NV_LIBCUSPARSE_DEV_VERSION=11.7.5.86-10 B
46ENV NV_LIBNPP_DEV_VERSION=11.8.0.86-10 B
47ENV NV_LIBNPP_DEV_PACKAGE=libnpp-dev-11-8=11.8.0.86-10 B
48ENV NV_LIBCUBLAS_DEV_VERSION=11.11.3.6-10 B
49ENV NV_LIBCUBLAS_DEV_PACKAGE_NAME=libcublas-dev-11-80 B
50ENV NV_LIBCUBLAS_DEV_PACKAGE=libcublas-dev-11-8=11.11.3.6-10 B
51ENV NV_CUDA_NSIGHT_COMPUTE_VERSION=11.8.0-10 B
52ENV NV_CUDA_NSIGHT_COMPUTE_DEV_PACKAGE=cuda-nsight-compute-11-8=11.8.0-10 B
53ENV NV_NVPROF_VERSION=11.8.87-10 B
54ENV NV_NVPROF_DEV_PACKAGE=cuda-nvprof-11-8=11.8.87-10 B
55ENV NV_LIBNCCL_DEV_PACKAGE_NAME=libnccl-dev0 B
56ENV NV_LIBNCCL_DEV_PACKAGE_VERSION=2.15.5-10 B
57ENV NCCL_VERSION=2.15.5-10 B
58ENV NV_LIBNCCL_DEV_PACKAGE=libnccl-dev=2.15.5-1+cuda11.80 B
59ARG TARGETARCH0 B
60LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B
61RUN |1 TARGETARCH=amd64 /bin/sh -c2.29 GB
62RUN |1 TARGETARCH=amd64 /bin/sh -c86.16 KB
63ENV LIBRARY_PATH=/usr/local/cuda/lib64/stubs0 B
64ENV NV_CUDNN_VERSION=8.9.6.500 B
65ENV NV_CUDNN_PACKAGE_NAME=libcudnn80 B
66ENV NV_CUDNN_PACKAGE=libcudnn8=8.9.6.50-1+cuda11.80 B
67ENV NV_CUDNN_PACKAGE_DEV=libcudnn8-dev=8.9.6.50-1+cuda11.80 B
68ARG TARGETARCH0 B
69LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B
70LABEL com.nvidia.cudnn.version=8.9.6.500 B
71RUN |1 TARGETARCH=amd64 /bin/sh -c1.34 GB
72ARG DV_GPU_BUILD0 B
73ARG VERSION_DEEPVARIANT0 B
74ARG PYTHON_VERSION0 B
75ARG TF_ENABLE_ONEDNN_OPTS0 B
76ENV DV_GPU_BUILD=10 B
77ENV VERSION_DEEPVARIANT=1.9.00 B
78ENV PYTHON_VERSION=3.100 B
79ENV TF_ENABLE_ONEDNN_OPTS=10 B
80WORKDIR /opt/0 B
81COPY file:dc0ce4981426a819cc4e2744c7e02088ed57ec7e1bce903865a7528e8769ace5 in . 21.98 KB
82WORKDIR /opt/deepvariant/bin/166 B
83COPY dir:869522c2752fa9b1a15c5350a29075d610dc6bf980198a795f496bbc0487236f in /opt/conda 230.97 MB
84COPY file:10ca0e62a16fb15a0dc47250bf1f8c38bdaf5103234f4faa15fb53d37e510527 in . 4.63 KB
85COPY file:302e27b40c45efa6eaeb10cbd94081adc73702c088120c4d6623d16bbedfefe6 in . 2.86 KB
86COPY file:146de84eeef3d764f66b94dc69fdc06bdfb97eb8d488b0d2729984f4e90830ca in . 9.15 MB
87COPY file:2b59e2f2492fe5e4d3b7c7e409518ad1e41025a3e61674c1bae07b5fbfb00ba7 in . 9.07 MB
88COPY file:bbefe4e3b921920faef964a86674b817f9ddb695ae32020af79b5fa4cbc10edb in . 9.07 MB
89COPY file:8c108a8faeddadb2f6b8f89219dcadbf1e79046abe9e823b11ec04861f8bcbab in . 8.99 MB
90COPY file:c007da9e9fb1e3800d8c15d4aa7b516c5099c5e9319fca52b9052c43ff4fed6a in . 8.99 MB
91COPY file:20d8345ed7012beed6d50f9de163d9df6796c6bb0173f502dd39c7d91def538a in . 133.92 KB
92COPY file:fb7c8efca452cd184f60c8bf3ee266e04af991bcaa8c64660c10b99f7b48b28a in . 8.9 MB
93COPY file:022798e47911098a038afbc602bd140133e05f3684ac8180a8864c8733dbe782 in . 7.66 KB
94/bin/sh -c ./run-prereq.sh4.55 GB
95/bin/sh -c update-alternatives --install /usr/bin/python31.93 KB
96/bin/sh -c BASH_HEADER='#!/bin/bash' && 492 B
97WORKDIR /opt/models/pangenome_aware_deepvariant/wgs196 B
98ADD 2843ae5df209f95969bdf23119d13afdd6f79b6ad8f62f7b856a16713bc29987 in . 315 B
99ADD cbc6e32ae855066ce101c97dd7c35cdad2bf3d201ae82802cad33edd4a918121 in . 342.01 KB
100ADD 715f6b1ebcd429ed3cfe0a793cc1e51a70e3c696411e8f0e12167a28722e7cc0 in . 280 B
101WORKDIR /opt/models/pangenome_aware_deepvariant/wgs/variables213 B
102ADD d56b97cf47dfca049fb76609f3687dcb6f0cd013dcd40005c0e33fb49bae9954 in . 77.17 MB
103ADD b2676a7837024fdbd17b560a6f69434b1ed0d1026480a4250df722d9c2477df0 in . 5.97 KB
104/bin/sh -c chmod -R +r77.51 MB
105WORKDIR /opt/models/pangenome_aware_deepvariant/wes199 B
106ADD d25a1ea76aaaf91eaa88c2b9f1baba9f00b14d1b1bdcdc9b190ade1c24410196 in . 324 B
107ADD cbc6e32ae855066ce101c97dd7c35cdad2bf3d201ae82802cad33edd4a918121 in . 342.03 KB
108ADD 715f6b1ebcd429ed3cfe0a793cc1e51a70e3c696411e8f0e12167a28722e7cc0 in . 284 B
109WORKDIR /opt/models/pangenome_aware_deepvariant/wes/variables218 B
110ADD 314294f6e9eaa33c3f7abd5ddc27f32b9f0211e20e2e8d166315e2f47b6d3b39 in . 78.11 MB
111ADD 7107d5055a507bb7d1657c5539da33ec695b199939b1d6d4e300b6c3c07bdce7 in . 5.99 KB
112/bin/sh -c chmod -R +r78.45 MB
113ENV PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/conda/bin:/opt/conda/envs/bio/bin:/opt/deepvariant/bin/pangenome_aware_deepvariant:/opt/deepvariant/bin0 B
114/bin/sh -c apt-get -y update20.56 MB
115WORKDIR /opt/deepvariant0 B
116CMD ["/opt/deepvariant/bin/run_pangenome_aware_deepvariant" "--help"]0 B

Command

 ARG RELEASE