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immcantation/suite:4.2.0

Machine learning & AI
Data science
Manifest digest

sha256:361fb1b55f3b155da62562a5b5de2190be34953557926733ec8ee4a76fe988ba

OS/ARCH

linux/amd64

Compressed size

1.23 GB

Last pushed

over 5 years by immcantation

Type

Image

Manifest digest

sha256:361fb1b55f3b155da62562a5b5de2190be34953557926733ec8ee4a76fe988ba

Image Layers

Image Layers

1LABEL maintainer=Clement Verna <[email protected]>0 B
2ENV DISTTAG=f33container FGC=f33 FBR=f330 B
3ADD file ... in / 59 MB
4CMD ["/bin/bash"]0 B
5LABEL maintainer=Jason Anthony Vander0 B
6VOLUME [/data]0 B
7VOLUME [/scratch]0 B
8VOLUME [/software]0 B
9VOLUME [/oasis]0 B
10COPY file:9452c203bae153fa936ff4d476c441b74ff3bc553f878448ecf3b9f5094e18f3 in /usr/local/bin/versions 3.04 KB
11COPY file:06acb9c5514b9bd9b628f2e5336fa4c90366a7ecd753984e24bf76ccd361731c in /usr/local/bin/builds 1.42 KB
12COPY file:74f8dceb7f8566db153be6f8ed9316fd6716cefab1372cc964e297da713e6308 in /usr/local/bin/pipelines 1.26 KB
13COPY file:26437693504a9a4e55bcf517d3a8f7290dd3275fc2322b33a202ee4ec08c16a1 in /usr/local/bin/rinstall 597 B
14/bin/sh -c (cd /etc/yum.repos.d; sed1.04 KB
15/bin/sh -c dnf -y update690.51 MB
16ENV LD_LIBRARY_PATH=/usr/lib64/R/lib:/usr/lib64/atlas0 B
17ARG R_REPO=http://lib.stat.cmu.edu/R/CRAN/0 B
18ARG R_DEPS=c('Rcpp', 0 B
19ARG R_BIOC_DEPS=c('Biostrings', 0 B
20|3 R_BIOC_DEPS=c('Biostrings', 115.7 MB
21LABEL maintainer=Jason Anthony Vander0 B
22COPY file:d19037058a05e3c531437e1a4d17e6abc4e84b56da43625ee77acd3fac244773 in /Version.yaml 321 B
23COPY file:3345da6290409964f7aa0c3effdcdd556e3d83695110560534891a301a9053dd in /Pipeline.yaml 357 B
24/bin/sh -c builds write -n134 B
25/bin/sh -c PACKAGE="immcantation" 25.91 KB
26/bin/sh -c MUSCLE=$(versions get -n578.74 KB
27/bin/sh -c VSEARCH=$(versions get -n650.75 KB
28/bin/sh -c CDHIT=$(versions get -n432.09 KB
29/bin/sh -c BLAST=$(versions get -n239.38 MB
30/bin/sh -c IGBLAST=$(versions get -n52.68 MB
31/bin/sh -c PHYLIP=$(versions get -n4.32 MB
32/bin/sh -c wget -q --show-progress5.24 MB
33/bin/sh -c AIRR_PY=$(versions get -n4.36 MB
34/bin/sh -c PACKAGE="presto" 125.98 KB
35/bin/sh -c PACKAGE="changeo" 176.34 KB
36/bin/sh -c PACKAGE="alakazam" 46.92 MB
37/bin/sh -c PACKAGE="shazam" 3.48 MB
38/bin/sh -c PACKAGE="tigger" 5.42 MB
39/bin/sh -c PACKAGE="scoper" 3.44 MB
40/bin/sh -c PACKAGE="prestor" 1.74 MB
41/bin/sh -c IGPHYML=$(versions get -n7.12 MB
42/bin/sh -c PACKAGE="rdi" 1.39 MB
43/bin/sh -c RABHIT=$(versions get -n17.92 MB
44/bin/sh -c fetch_imgtdb.sh -o /usr/local/share/germlines/imgt997.39 KB
45ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/local/share/igphyml/src0 B
46/bin/sh -c useradd magus -u2.56 KB
47CMD ["/bin/sh" "-c" "echo0 B

Command

 LABEL maintainer=Clement Verna <[email protected]>