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markiewicz/fmriprep:24.1.0rc2

Manifest digest

sha256:2c8b0750ff5cf51855d91deee85a770b27f3c324aaed4d98a92ac2095e58710a

OS/ARCH

linux/amd64

Compressed size

2.81 GB

Last pushed

about 2 years by markiewicz

Type

Image

Manifest digest

sha256:2c8b0750ff5cf51855d91deee85a770b27f3c324aaed4d98a92ac2095e58710a

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=22.040 B
5ADD file ... in / 28.18 MB
6CMD ["/bin/bash"]0 B
7ENV DEBIAN_FRONTEND=noninteractive LANG=en_US.UTF-8 LC_ALL=en_US.UTF-80 B
8RUN /bin/sh -c apt-get update97.54 MB
9RUN /bin/sh -c GNUPGHOME=/tmp gpg2.37 KB
10RUN /bin/sh -c apt-get update17.23 MB
11COPY /opt/freesurfer /opt/freesurfer # buildkit939.51 MB
12COPY /opt/afni-latest /opt/afni-latest # buildkit8.41 MB
13COPY /opt/workbench /opt/workbench # buildkit83.59 MB
14COPY /opt/convert3d/bin/c3d_affine_tool /usr/bin/c3d_affine_tool # buildkit9.13 MB
15ENV OS=Linux FS_OVERRIDE=0 FIX_VERTEX_AREA= FSF_OUTPUT_FORMAT=nii.gz0 B
16ENV SUBJECTS_DIR=/opt/freesurfer/subjects FUNCTIONALS_DIR=/opt/freesurfer/sessions MNI_DIR=/opt/freesurfer/mni LOCAL_DIR=/opt/freesurfer/local0 B
17ENV PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.5 MNI_PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.5 PATH=/opt/freesurfer/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
18ENV PATH=/opt/afni-latest:/opt/freesurfer/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin AFNI_IMSAVE_WARNINGS=NO AFNI_PLUGINPATH=/opt/afni-latest0 B
19ENV PATH=/opt/workbench/bin_linux64:/opt/afni-latest:/opt/freesurfer/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin LD_LIBRARY_PATH=/opt/workbench/lib_linux64:0 B
20RUN /bin/sh -c useradd -m4.25 KB
21WORKDIR /home/fmriprep32 B
22ENV HOME=/home/fmriprep LD_LIBRARY_PATH=/usr/lib/x86_64-linux-gnu:/opt/workbench/lib_linux64:0 B
23COPY /bin/micromamba /bin/micromamba # buildkit5.78 MB
24COPY /opt/conda/envs/fmriprep /opt/conda/envs/fmriprep # buildkit1.46 GB
25ENV MAMBA_ROOT_PREFIX=/opt/conda0 B
26RUN /bin/sh -c micromamba shell2.83 KB
27ENV PATH=/opt/conda/envs/fmriprep/bin:/opt/workbench/bin_linux64:/opt/afni-latest:/opt/freesurfer/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin CPATH=/opt/conda/envs/fmriprep/include: LD_LIBRARY_PATH=/opt/conda/envs/fmriprep/lib:/usr/lib/x86_64-linux-gnu:/opt/workbench/lib_linux64:0 B
28COPY scripts/fetch_templates.py fetch_templates.py # buildkit1.33 KB
29RUN /bin/sh -c python fetch_templates.py89.19 MB
30ENV LANG=C.UTF-8 LC_ALL=C.UTF-8 PYTHONNOUSERSITE=1 FSLDIR=/opt/conda/envs/fmriprep0 B
31ENV MKL_NUM_THREADS=1 OMP_NUM_THREADS=10 B
32RUN /bin/sh -c curl -L8.97 MB
33COPY /src/dist/*.whl . # buildkit233.78 KB
34RUN /bin/sh -c pip install2.15 MB
35RUN /bin/sh -c find $HOME89.42 MB
36ENV IS_DOCKER_8395080871=10 B
37RUN /bin/sh -c ldconfig #5.58 KB
38WORKDIR /tmp32 B
39ENTRYPOINT ["/opt/conda/envs/fmriprep/bin/fmriprep"]0 B
40ARG BUILD_DATE0 B
41ARG VCS_REF0 B
42ARG VERSION0 B
43LABEL org.label-schema.build-date= org.label-schema.name=fMRIPrep org.label-schema.description=fMRIPrep -0 B

Command

 ARG RELEASE