mgibio/pindel2vcf-cwl:0.6.3

Languages & frameworks

Machine learning & AI

Data science

Manifest digest

sha256:88b841616de08b68be6b09e95f0d335867b55f4f7a642c5a3ec13603ee493266

OS/ARCH

linux/amd64

Compressed size

412.99 MB

Last pushed

almost 10 years by mgibio

Type

Image

Manifest digest

sha256:88b841616de08b68be6b09e95f0d335867b55f4f7a642c5a3ec13603ee493266

Image Layers

1ADD file ... in / 47.78 MB

2/bin/sh -c set -xe &&824 B

3/bin/sh -c rm -rf /var/lib/apt/lists/*518 B

4/bin/sh -c sed -i 's/^#\s*$deb.*universe$$/\1/g'682 B

5/bin/sh -c mkdir -p /run/systemd162 B

6CMD ["/bin/bash"]0 B

7MAINTAINER Feiyu Du <[email protected]>0 B

8LABEL version=v0.2.5b8 description=Pindel image0 B

9/bin/sh -c apt-get update &&86.43 MB

10WORKDIR /opt0 B

11/bin/sh -c wget https://github.com/samtools/samtools/releases/download/1.2/samtools-1.2.tar.bz2 &&9.41 MB

12WORKDIR /opt/samtools-1.20 B

13/bin/sh -c make && make11.61 MB

14WORKDIR /opt0 B

15/bin/sh -c wget https://github.com/genome/pindel/archive/v0.2.5b8.tar.gz &&248.2 MB

16WORKDIR /opt/pindel-0.2.5b80 B

17/bin/sh -c ./INSTALL /opt/samtools-1.2/htslib-1.2.19.56 MB

18WORKDIR /0 B

19/bin/sh -c ln -s /opt/pindel-0.2.5b8/pindel158 B

20ENTRYPOINT ["/usr/bin/pindel"]0 B

21MAINTAINER Feiyu Du <[email protected]>0 B

22LABEL version=0.6.3 description=pindel2vcf image0 B

23/bin/sh -c ln -s /opt/pindel-0.2.5b8/pindel2vcf166 B

24ENTRYPOINT ["/usr/bin/pindel2vcf"]0 B

25ENTRYPOINT []0 B

26CMD ["/usr/bin/pindel2vcf"]0 B

Command

ADD file:2ca910a8c0cef4144f7c4ef779f9d85d5f451a776c3c67fc83a7a461de73e7d7 in /