nextstrain/ncov-ingest:branch-upgrade-python

Manifest digest

sha256:8418635cb439cd1ec1aa054eb6013e8af586f852bb9e90280ae38b1914241d5e

OS/ARCH

linux/amd64

Compressed size

789.69 MB

Last pushed

almost 4 years by nextstrainbot

Type

Image

Manifest digest

sha256:8418635cb439cd1ec1aa054eb6013e8af586f852bb9e90280ae38b1914241d5e

Image Layers

Image Layers

1ADD file ... in / 29.96 MB

2CMD ["bash"]0 B

3ENV PATH=/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

4ENV LANG=C.UTF-80 B

5/bin/sh -c set -eux; apt-get1.03 MB

6ENV GPG_KEY=A035C8C19219BA821ECEA86B64E628F8D684696D0 B

7ENV PYTHON_VERSION=3.10.80 B

8/bin/sh -c set -eux; savedAptMark="$(apt-mark11.54 MB

9/bin/sh -c set -eux; for234 B

10ENV PYTHON_PIP_VERSION=22.2.20 B

11ENV PYTHON_SETUPTOOLS_VERSION=63.2.00 B

12ENV PYTHON_GET_PIP_URL=https://github.com/pypa/get-pip/raw/5eaac1050023df1f5c98b173b248c260023f2278/public/get-pip.py0 B

13ENV PYTHON_GET_PIP_SHA256=5aefe6ade911d997af080b315ebcb7f882212d070465df544e1175ac2be519b40 B

14/bin/sh -c set -eux; savedAptMark="$(apt-mark3.18 MB

15CMD ["python3"]0 B

16RUN /bin/sh -c apt-get update33.18 MB

17RUN /bin/sh -c curl -fsSL43.64 MB

18COPY bashrc /etc/bash.bashrc # buildkit378 B

19COPY /final/bin/ /usr/local/bin/ # buildkit49.45 MB

20COPY /final/share/ /usr/local/share/ # buildkit38.17 KB

21COPY /final/libexec/ /usr/local/libexec/ # buildkit15.51 MB

22ENV MAFFT_BINARIES=/usr/local/libexec0 B

23RUN /bin/sh -c chmod a+rx24.81 MB

24COPY /usr/local/lib/python3.10/site-packages/ /usr/local/lib/python3.10/site-packages/ # buildkit319.56 MB

25COPY /usr/local/bin/augur /usr/local/bin/aws /usr/local/bin/envdir /usr/local/bin/nextstrain5.01 KB

26COPY /usr/lib/node_modules/ /usr/lib/node_modules/ # buildkit85.09 KB

27RUN /bin/sh -c ln -sv197 B

28COPY /nextstrain /nextstrain # buildkit199.86 MB

29COPY entrypoint entrypoint-aws-batch /sbin/ #1.34 KB

30RUN /bin/sh -c chmod a+rx32 B

31RUN /bin/sh -c chmod a+rwXt105 B

32ENV HOME=/nextstrain0 B

33RUN /bin/sh -c useradd nextstrain1.09 KB

34WORKDIR /nextstrain/build132 B

35RUN /bin/sh -c chown nextstrain:nextstrain147 B

36ENTRYPOINT ["/sbin/entrypoint"]0 B

37ARG GIT_REVISION0 B

38LABEL maintainer=Nextstrain team <[email protected]>0 B

39LABEL org.opencontainers.image.authors=Nextstrain team <[email protected]>0 B

40LABEL org.opencontainers.image.source=https://github.com/nextstrain/docker-base0 B

41LABEL org.opencontainers.image.revision=09c73ba062b647dc969cf21b7f475974478d1d220 B

42LABEL org.nextstrain.image.name=nextstrain/base0 B

43RUN /bin/sh -c apt-get update16.68 MB

44RUN /bin/sh -c python3 -m28.13 MB

45COPY Pipfile Pipfile.lock /nextstrain/ncov-ingest/ #28.25 KB

46RUN /bin/sh -c PIPENV_PIPFILE=/nextstrain/ncov-ingest/Pipfile pipenv13.02 MB

47ENV PATH=./bin:/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

48ARG GIT_REVISION0 B

49LABEL org.opencontainers.image.source=https://github.com/nextstrain/ncov-ingest0 B

50LABEL org.opencontainers.image.revision=e8d196c0 B

51LABEL org.nextstrain.image.name=nextstrain/ncov-ingest0 B

Command

ADD file:b78b777208be08edd8f297035cdfbacddb45170ad778fd643c792ee045187e39 in /