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oesteban/preprocessing-workflow:chrisfilo-patch-1

Manifest digest

sha256:e96f6480766dbb04dca9b229daf1422e03950d4ff0140410fe732290cc1737b8

OS/ARCH

linux/amd64

Compressed size

3.66 GB

Last pushed

about 10 years by oesteban

Type

Image

Manifest digest

sha256:e96f6480766dbb04dca9b229daf1422e03950d4ff0140410fe732290cc1737b8

Image Layers

Image Layers

1ADD file ... in /48.99 MB
2CMD ["/bin/bash"]0 B
3/bin/sh -c echo 'deb http://neuro.debian.net/debian213 B
4/bin/sh -c echo 'deb http://neuro.debian.net/debian221 B
5/bin/sh -c echo '#deb-src http://neuro.debian.net/debian-devel239 B
6/bin/sh -c apt-key adv --recv-keys3.09 KB
7MAINTAINER Stanford Center for0 B
8/bin/sh -c ln -snf /bin/bash124 B
9ENV SHELL=/bin/bash0 B
10ARG DEBIAN_FRONTEND=noninteractive0 B
11|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c sed549.42 MB
12ENV FSLDIR=/usr/share/fsl/5.0 FSLOUTPUTTYPE=NIFTI_GZ FSLMULTIFILEQUIT=TRUE0 B
13|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c mkdir417.43 MB
14ENV ANTSPATH=/opt/ants0 B
15ENV PATH=/opt/ants:/usr/lib/fsl/5.0:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
16|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c curl1.84 GB
17|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c curl23.44 MB
18ENV OS=Linux FS_OVERRIDE=0 FIX_VERTEX_AREA=0 B
19CMD ["/bin/bash"]0 B
20MAINTAINER Stanford Center for0 B
21WORKDIR /root0 B
22/bin/sh -c curl -sSLO https://repo.continuum.io/miniconda/Miniconda2-latest-Linux-x86_64.sh31.41 MB
23ENV PATH=/usr/local/miniconda/bin:/opt/freesurfer/bin:/opt/freesurfer/fsfast/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/ants:/usr/lib/fsl/5.0:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
24ENV LANG=C.UTF-80 B
25ENV LC_ALL=C.UTF-80 B
26/bin/sh -c conda config --add590.98 MB
27/bin/sh -c pip install --upgrade697.65 KB
28CMD ["/bin/bash"]0 B
29/bin/sh -c mkdir -p /opt/c3d29.99 MB
30ENV C3DPATH=/opt/c3d0 B
31ENV PATH=/opt/c3d:/usr/local/miniconda/bin:/opt/freesurfer/bin:/opt/freesurfer/fsfast/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/ants:/usr/lib/fsl/5.0:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
32/bin/sh -c rm -rf /usr/local/miniconda/lib/python*/site-packages/nipype*66.92 MB
33WORKDIR /root/src0 B
34ADD dir:16a6b1d85b4af4f724759f20cc845e1174722e73cc655b9bf97b83c16fbf0b1e in preprocessing-workflow/ 133.56 KB
35/bin/sh -c cd preprocessing-workflow &&102.54 MB
36WORKDIR /root/0 B
37ADD multi:42779b248201b8cd2630491a64b8985feea320b2d79eee01cfcc79b60d5be301 in /usr/bin/ 260 B
38/bin/sh -c chmod +x /usr/bin/run_*257 B
39ENTRYPOINT ["/usr/bin/run_fmriprep"]0 B
40CMD ["--help"]0 B

Command

ADD file:0e0565652aa852f62033d99f84892216020d30f64521ded5e72d4940bc4c9697 in /