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oesteban/preprocessing-workflow:docker

Manifest digest

sha256:1f0e9843535be31a4f5856328d013ef512e94e997f861f2ced6e9d1b9b883e1a

OS/ARCH

linux/amd64

Compressed size

3.63 GB

Last pushed

about 10 years by oesteban

Type

Image

Manifest digest

sha256:1f0e9843535be31a4f5856328d013ef512e94e997f861f2ced6e9d1b9b883e1a

Image Layers

Image Layers

1ADD file ... in /48.99 MB
2CMD ["/bin/bash"]0 B
3/bin/sh -c echo 'deb http://neuro.debian.net/debian213 B
4/bin/sh -c echo 'deb http://neuro.debian.net/debian221 B
5/bin/sh -c echo '#deb-src http://neuro.debian.net/debian-devel239 B
6/bin/sh -c apt-key adv --recv-keys3.09 KB
7MAINTAINER Stanford Center for0 B
8/bin/sh -c ln -snf /bin/bash124 B
9ENV SHELL=/bin/bash0 B
10ARG DEBIAN_FRONTEND=noninteractive0 B
11|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c sed549.42 MB
12ENV FSLDIR=/usr/share/fsl/5.0 FSLOUTPUTTYPE=NIFTI_GZ FSLMULTIFILEQUIT=TRUE0 B
13|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c mkdir417.43 MB
14ENV ANTSPATH=/opt/ants0 B
15ENV PATH=/opt/ants:/usr/lib/fsl/5.0:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
16|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c curl1.84 GB
17|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c curl23.44 MB
18ENV OS=Linux FS_OVERRIDE=0 FIX_VERTEX_AREA=0 B
19CMD ["/bin/bash"]0 B
20MAINTAINER Stanford Center for0 B
21WORKDIR /root0 B
22/bin/sh -c curl -sSLO https://repo.continuum.io/miniconda/Miniconda2-latest-Linux-x86_64.sh31.41 MB
23ENV PATH=/usr/local/miniconda/bin:/opt/freesurfer/bin:/opt/freesurfer/fsfast/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/ants:/usr/lib/fsl/5.0:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
24ENV LANG=C.UTF-80 B
25ENV LC_ALL=C.UTF-80 B
26/bin/sh -c conda config --add590.98 MB
27/bin/sh -c pip install --upgrade697.65 KB
28CMD ["/bin/bash"]0 B
29/bin/sh -c rm -rf /usr/local/miniconda/lib/python*/site-packages/nipype*66.92 MB
30WORKDIR /root/src0 B
31ADD dir:02ee0da8b6cbba1a3db7980014a5201dfce7e937b724731e3e35463f1a06b6ca in preprocessing-workflow/ 130.08 KB
32/bin/sh -c cd preprocessing-workflow &&102.54 MB
33WORKDIR /root/0 B
34ADD multi:42779b248201b8cd2630491a64b8985feea320b2d79eee01cfcc79b60d5be301 in /usr/bin/ 259 B
35/bin/sh -c chmod +x /usr/bin/run_*257 B
36ENTRYPOINT ["/usr/bin/run_fmriprep"]0 B
37CMD ["--help"]0 B

Command

ADD file:0e0565652aa852f62033d99f84892216020d30f64521ded5e72d4940bc4c9697 in /