staphb/clair3:1.1.0

Index digest

sha256:6861d3193cd199dc520186fa0c5d05393b47e6015e19c9006c1c29db610b1a8a

OS/ARCH

linux/amd64

Compressed size

679.55 MB

Last pushed

over 1 year by staphbadmin

Type

Image

Manifest digest

sha256:39876da626e4f0ce84a4e699977a461ecd00aae53362ffdd8a1b2031c8db6f35

Image Layers

Image Layers

1ARG RELEASE0 B

2ARG LAUNCHPAD_BUILD_ARCH0 B

3LABEL org.opencontainers.image.ref.name=ubuntu0 B

4LABEL org.opencontainers.image.version=22.040 B

5ADD file ... in / 28.17 MB

6CMD ["/bin/bash"]0 B

7ARG CERT_SOURCE=/etc/ssl/certs/ca-certificates.crt0 B

8ARG MAMBA_USER=mambauser0 B

9ARG MAMBA_USER_ID=574390 B

10ARG MAMBA_USER_GID=574390 B

11ENV MAMBA_USER=mambauser0 B

12ENV MAMBA_USER_ID=574390 B

13ENV MAMBA_USER_GID=574390 B

14ENV LANG=C.UTF-8 LC_ALL=C.UTF-80 B

15ENV ENV_NAME=base0 B

16ENV MAMBA_ROOT_PREFIX=/opt/conda0 B

17ENV MAMBA_EXE=/bin/micromamba0 B

18COPY /bin/micromamba /bin/micromamba # buildkit6.41 MB

19COPY /etc/ssl/certs/ca-certificates.crt /etc/ssl/certs/ca-certificates.crt # buildkit123.6 KB

20COPY _dockerfile_initialize_user_accounts.sh /usr/local/bin/_dockerfile_initialize_user_accounts.sh # buildkit551 B

21COPY _dockerfile_setup_root_prefix.sh /usr/local/bin/_dockerfile_setup_root_prefix.sh # buildkit285 B

22RUN |4 CERT_SOURCE=/etc/ssl/certs/ca-certificates.crt MAMBA_USER=mambauser MAMBA_USER_ID=5743922.05 KB

23USER mambauser0 B

24WORKDIR /tmp32 B

25COPY _entrypoint.sh /usr/local/bin/_entrypoint.sh # buildkit684 B

26COPY _activate_current_env.sh /usr/local/bin/_activate_current_env.sh # buildkit658 B

27ENTRYPOINT ["/usr/local/bin/_entrypoint.sh"]0 B

28CMD ["/bin/bash"]0 B

29COPY _dockerfile_shell.sh /usr/local/bin/_dockerfile_shell.sh # buildkit347 B

30SHELL [/usr/local/bin/_dockerfile_shell.sh]0 B

31ARG CLAIR3_VER=1.1.00 B

32USER root0 B

33WORKDIR /0 B

34LABEL base.image=mambaorg/micromamba:2.0.8-ubuntu22.040 B

35LABEL dockerfile.version=10 B

36LABEL software=CLAIR30 B

37LABEL software.version=1.1.00 B

38LABEL description=Clair3 is a germline0 B

39LABEL website=https://github.com/HKU-BAL/Clair30 B

40LABEL license=https://github.com/HKU-BAL/Clair3/blob/main/LICENSE.md0 B

41LABEL maintainer=Kutluhan Incekara0 B

42LABEL [email protected]0 B

43RUN |1 CLAIR3_VER=1.1.0 /usr/local/bin/_dockerfile_shell.sh apt-get32 B

44RUN |1 CLAIR3_VER=1.1.0 /usr/local/bin/_dockerfile_shell.sh micromamba394.5 MB

45ENV PATH=/opt/conda/bin/:/clair3:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin LC_ALL=C.UTF-80 B

46RUN |1 CLAIR3_VER=1.1.0 /usr/local/bin/_dockerfile_shell.sh pypy35.22 MB

47COPY /clair3 /clair3 # buildkit245.11 MB

48CMD ["/usr/local/bin/_dockerfile_shell.sh" "run_clair3.sh"]0 B

49WORKDIR /data93 B

Command

 ARG RELEASE