staphb/pangolin:4.3.1-pdata-1.28

Index digest

sha256:1584ce0d781f36bd45b4dfa15c619153b161f4833fb6c6bb63a91e54303cf61c

OS/ARCH

linux/amd64

Compressed size

1.12 GB

Last pushed

about 2 years by staphbadmin

Type

Image

Manifest digest

sha256:efaf27e49ed3a865f998b330406c7bd4a3d5dc88190c1d2d95cb2811f50a62ca

Image Layers

Image Layers

1ADD file ... in / 27.8 MB

2CMD ["bash"]0 B

3ENV LANG=C.UTF-8 LC_ALL=C.UTF-80 B

4ENV ENV_NAME=base0 B

5ENV MAMBA_ROOT_PREFIX=/opt/conda0 B

6ENV MAMBA_EXE=/bin/micromamba0 B

7COPY /etc/ssl/certs/ca-certificates.crt /etc/ssl/certs/ca-certificates.crt # buildkit119.8 KB

8COPY /tmp/bin/micromamba /bin/micromamba # buildkit5.78 MB

9RUN /bin/sh -c { grep32 B

10ARG MAMBA_USER=mambauser0 B

11ARG MAMBA_USER_ID=574390 B

12ARG MAMBA_USER_GID=574390 B

13ENV MAMBA_USER=mambauser0 B

14ENV MAMBA_USER_ID=574390 B

15ENV MAMBA_USER_GID=574390 B

16COPY _dockerfile_initialize_user_accounts.sh /usr/local/bin/_dockerfile_initialize_user_accounts.sh # buildkit528 B

17COPY _dockerfile_setup_root_prefix.sh /usr/local/bin/_dockerfile_setup_root_prefix.sh # buildkit287 B

18RUN |3 MAMBA_USER=mambauser MAMBA_USER_ID=57439 MAMBA_USER_GID=574393.69 KB

19USER mambauser0 B

20WORKDIR /tmp32 B

21COPY _apptainer_shell.sh /usr/local/bin/_apptainer_shell.sh # buildkit218 B

22COPY _entrypoint.sh /usr/local/bin/_entrypoint.sh # buildkit687 B

23COPY _activate_current_env.sh /usr/local/bin/_activate_current_env.sh # buildkit650 B

24ENTRYPOINT ["/usr/local/bin/_entrypoint.sh"]0 B

25CMD ["/bin/bash"]0 B

26COPY _dockerfile_shell.sh /usr/local/bin/_dockerfile_shell.sh # buildkit348 B

27SHELL [/usr/local/bin/_dockerfile_shell.sh]0 B

28USER root0 B

29WORKDIR /0 B

30ARG PANGOLIN_VER=v4.3.10 B

31ARG PANGOLIN_DATA_VER=v1.280 B

32ARG SCORPIO_VER=v0.3.190 B

33ARG CONSTELLATIONS_VER=v0.1.120 B

34ARG USHER_VER=0.6.30 B

35LABEL base.image=mambaorg/micromamba:1.5.80 B

36LABEL dockerfile.version=10 B

37LABEL software=pangolin0 B

38LABEL software.version=v4.3.10 B

39LABEL description=Conda environment for Pangolin.0 B

40LABEL website=https://github.com/cov-lineages/pangolin0 B

41LABEL license=GNU General Public License0 B

42LABEL license.url=https://github.com/cov-lineages/pangolin/blob/master/LICENSE.txt0 B

43LABEL maintainer=Curtis Kapsak0 B

44LABEL [email protected]0 B

45RUN |5 PANGOLIN_VER=v4.3.1 PANGOLIN_DATA_VER=v1.28 SCORPIO_VER=v0.3.1932.46 MB

46RUN |5 PANGOLIN_VER=v4.3.1 PANGOLIN_DATA_VER=v1.28 SCORPIO_VER=v0.3.19204.44 KB

47ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin LC_ALL=C.UTF-80 B

48RUN |5 PANGOLIN_VER=v4.3.1 PANGOLIN_DATA_VER=v1.28 SCORPIO_VER=v0.3.19670.71 MB

49ENV ENV_NAME=pangolin0 B

50ARG MAMBA_DOCKERFILE_ACTIVATE=10 B

51WORKDIR /pangolin32 B

52RUN |6 PANGOLIN_VER=v4.3.1 PANGOLIN_DATA_VER=v1.28 SCORPIO_VER=v0.3.19409.88 MB

53WORKDIR /data32 B

54ENV PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/conda/envs/pangolin/bin/ XDG_CACHE_HOME=/tmp0 B

55CMD ["pangolin" "-h"]0 B

Command

ADD file:5f9954090af042b377ea0d1d184faa64d2e9d4c946b6c3898d52aff47e764056 in /