staphb/plassembler:latest

Index digest

sha256:7d92f4811bc0e8d3ebc2daac23fc2ba34f00d944de599e1b67a5732703758c2a

OS/ARCH

linux/amd64

Compressed size

1.66 GB

Last pushed

1 day by staphbadmin

Type

Image

Manifest digest

sha256:5f1b50bd23e6253305b2df520606f220aaa8adde9d334d299dec1eeabbb5a92e

Image Layers

Image Layers

1ARG RELEASE0 B

2ARG LAUNCHPAD_BUILD_ARCH0 B

3LABEL org.opencontainers.image.version=24.040 B

4ADD file ... in / 28.37 MB

5CMD ["/bin/bash"]0 B

6ARG CERT_SOURCE=/etc/ssl/certs/ca-certificates.crt0 B

7ARG MAMBA_USER=mambauser0 B

8ARG MAMBA_USER_ID=574390 B

9ARG MAMBA_USER_GID=574390 B

10ENV MAMBA_USER=mambauser0 B

11ENV MAMBA_USER_ID=574390 B

12ENV MAMBA_USER_GID=574390 B

13ENV LANG=C.UTF-8 LC_ALL=C.UTF-80 B

14ENV ENV_NAME=base0 B

15ENV MAMBA_ROOT_PREFIX=/opt/conda0 B

16ENV MAMBA_EXE=/bin/micromamba0 B

17ENV CONDA_OVERRIDE_CUDA=0 B

18COPY /bin/micromamba /bin/micromamba # buildkit7.37 MB

19COPY /etc/ssl/certs/ca-certificates.crt /etc/ssl/certs/ca-certificates.crt # buildkit103.81 KB

20COPY _dockerfile_initialize_user_accounts.sh /usr/local/bin/_dockerfile_initialize_user_accounts.sh # buildkit553 B

21COPY _dockerfile_setup_root_prefix.sh /usr/local/bin/_dockerfile_setup_root_prefix.sh # buildkit284 B

22RUN |4 CERT_SOURCE=/etc/ssl/certs/ca-certificates.crt MAMBA_USER=mambauser MAMBA_USER_ID=574393.98 KB

23USER mambauser0 B

24WORKDIR /tmp32 B

25COPY _apptainer_shell.sh /usr/local/bin/_apptainer_shell.sh # buildkit216 B

26COPY _entrypoint.sh /usr/local/bin/_entrypoint.sh # buildkit703 B

27COPY _activate_current_env.sh /usr/local/bin/_activate_current_env.sh # buildkit658 B

28ENTRYPOINT ["/usr/local/bin/_entrypoint.sh"]0 B

29CMD ["/bin/bash"]0 B

30COPY _dockerfile_shell.sh /usr/local/bin/_dockerfile_shell.sh # buildkit347 B

31SHELL [/usr/local/bin/_dockerfile_shell.sh]0 B

32ARG PLASSEMBLER_VERSION=1.8.50 B

33USER root0 B

34WORKDIR /0 B

35LABEL base.image=mambaorg/micromamba:2.9.0-ubuntu24.040 B

36LABEL dockerfile.version=10 B

37LABEL software=PLASSEMBLER0 B

38LABEL software.version=1.8.50 B

39LABEL description=Hybrid plasmid assembly0 B

40LABEL website=https://github.com/gbouras13/plassembler0 B

41LABEL license=https://github.com/gbouras13/plassembler/blob/main/LICENSE0 B

42LABEL maintainer=Erin Young0 B

43LABEL [email protected]0 B

44RUN |1 PLASSEMBLER_VERSION=1.8.5 /usr/local/bin/_dockerfile_shell.sh apt-get3.9 MB

45RUN |1 PLASSEMBLER_VERSION=1.8.5 /usr/local/bin/_dockerfile_shell.sh micromamba1.27 GB

46ENV PATH=/opt/conda/bin/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin TERM=xterm-256color LC_ALL=C.UTF-80 B

47CMD ["plassembler" "--help"]0 B

48RUN |1 PLASSEMBLER_VERSION=1.8.5 /usr/local/bin/_dockerfile_shell.sh plassembler362.34 MB

49WORKDIR /data32 B

Command

 ARG RELEASE