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ontresearch/medaka:sha3dc8413c2af77a427048b091c7a69b638ba30cfe

Multi-platform
Index digest

sha256:f120ee98922aa3f21dea7a8932558180b1ab42c25448ca09e3b88bc125222b16

OS/ARCH

Compressed size

2.22 GB

Last pushed

about 1 year by epi2melabs

Type

Image

Manifest digest

sha256:96ed6ef2645fd4577fac957305c3f29219b47a73ac88b2a78ae0af1125020b31

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=20.040 B
5ADD file ... in / 25.94 MB
6CMD ["/bin/bash"]0 B
7ENV NVARCH=sbsa0 B
8ENV NVIDIA_REQUIRE_CUDA=cuda>=11.20 B
9ENV NV_CUDA_CUDART_VERSION=11.2.152-10 B
10ARG TARGETARCH0 B
11LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B
12RUN |1 TARGETARCH=arm64 /bin/sh -c7.42 MB
13ENV CUDA_VERSION=11.2.20 B
14RUN |1 TARGETARCH=arm64 /bin/sh -c279.46 KB
15RUN |1 TARGETARCH=arm64 /bin/sh -c188 B
16ENV PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
17ENV LD_LIBRARY_PATH=/usr/local/nvidia/lib:/usr/local/nvidia/lib640 B
18COPY NGC-DL-CONTAINER-LICENSE / # buildkit6.72 KB
19ENV NVIDIA_VISIBLE_DEVICES=all0 B
20ENV NVIDIA_DRIVER_CAPABILITIES=compute,utility0 B
21ENV NV_CUDA_LIB_VERSION=11.2.2-10 B
22ENV NV_NVTX_VERSION=11.2.152-10 B
23ENV NV_LIBNPP_VERSION=11.3.2.152-10 B
24ENV NV_LIBNPP_PACKAGE=libnpp-11-2=11.3.2.152-10 B
25ENV NV_LIBCUSPARSE_VERSION=11.4.1.1152-10 B
26ENV NV_LIBCUBLAS_PACKAGE_NAME=libcublas-11-20 B
27ENV NV_LIBCUBLAS_VERSION=11.4.1.1043-10 B
28ENV NV_LIBCUBLAS_PACKAGE=libcublas-11-2=11.4.1.1043-10 B
29ENV NV_LIBNCCL_PACKAGE_NAME=libnccl20 B
30ENV NV_LIBNCCL_PACKAGE_VERSION=2.8.4-10 B
31ENV NCCL_VERSION=2.8.4-10 B
32ENV NV_LIBNCCL_PACKAGE=libnccl2=2.8.4-1+cuda11.20 B
33ARG TARGETARCH0 B
34LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B
35RUN |1 TARGETARCH=arm64 /bin/sh -c1.03 GB
36RUN |1 TARGETARCH=arm64 /bin/sh -c59.78 KB
37COPY entrypoint.d/ /opt/nvidia/entrypoint.d/ # buildkit1.64 KB
38COPY nvidia_entrypoint.sh /opt/nvidia/ # buildkit1.49 KB
39ENV NVIDIA_PRODUCT_NAME=CUDA0 B
40ENTRYPOINT ["/opt/nvidia/nvidia_entrypoint.sh"]0 B
41ENV NV_CUDNN_VERSION=8.1.1.330 B
42ENV NV_CUDNN_PACKAGE_NAME=libcudnn80 B
43ENV NV_CUDNN_PACKAGE=libcudnn8=8.1.1.33-1+cuda11.20 B
44ARG TARGETARCH0 B
45LABEL maintainer=NVIDIA CORPORATION <[email protected]>0 B
46LABEL com.nvidia.cudnn.version=8.1.1.330 B
47RUN |1 TARGETARCH=arm64 /bin/sh -c684.89 MB
48ENV DEBIAN_FRONTEND=noninteractive0 B
49LABEL maintainer=Oxford Nanopore Technologies0 B
50ARG WF_USER=epi2melabs0 B
51ARG WF_UID=10000 B
52ARG WF_GID=1000 B
53ARG ARCH=linux-640 B
54SHELL [/bin/bash -o pipefail -c]0 B
55RUN |4 WF_USER=epi2melabs WF_UID=1000 WF_GID=1001.16 MB
56ENV CONDA_DIR=/home/epi2melabs/conda SHELL=/bin/bash WF_USER=epi2melabs WF_UID=10000 B
57ENV HOME=/home/epi2melabs PATH=/home/epi2melabs/conda/bin:/usr/local/nvidia/bin:/usr/local/cuda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
58COPY fix-permissions /usr/local/bin/fix-permissions # buildkit678 B
59RUN |4 WF_USER=epi2melabs WF_UID=1000 WF_GID=100674 B
60COPY entrypoint /usr/local/bin/entrypoint.sh # buildkit370 B
61RUN |4 WF_USER=epi2melabs WF_UID=1000 WF_GID=100367 B
62ENTRYPOINT ["/usr/local/bin/entrypoint.sh"]0 B
63RUN |4 WF_USER=epi2melabs WF_UID=1000 WF_GID=1005.68 KB
64USER 10000 B
65WORKDIR /home/epi2melabs32 B
66RUN |4 WF_USER=epi2melabs WF_UID=1000 WF_GID=1006.37 MB
67ENV MAMBA_EXE=/home/epi2melabs/bin/micromamba0 B
68ENV MAMBA_ROOT_PREFIX=/home/epi2melabs/conda0 B
69USER 10000 B
70WORKDIR /home/epi2melabs32 B
71ARG ENVFILE=environment.yaml0 B
72ARG ROOT_INIT_SCRIPT=root_init_script.sh0 B
73ARG BEFORE_SCRIPT=before_script.sh0 B
74ARG POST_INSTALL_SCRIPT=post_install_script.sh0 B
75ARG AFTER_SCRIPT=after_script.sh0 B
76ARG BIN_DIR=bin0 B
77ENV MEDAKA_EXTRA_MODELS_PATH=/models0 B
78USER 00 B
79COPY root_init_script.sh /home/epi2melabs/ # buildkit228 B
80COPY bin/* /usr/local/bin/ # buildkit760 B
81COPY whalefish_info /usr/share/whalefish/info # buildkit253 B
82RUN |6 ENVFILE=environment.yaml ROOT_INIT_SCRIPT=root_init_script.sh BEFORE_SCRIPT=before_script.sh32 B
83USER 10000 B
84COPY before_script.sh /home/epi2melabs/ # buildkit225 B
85COPY post_install_script.sh /home/epi2melabs/ # buildkit230 B
86COPY after_script.sh /home/epi2melabs/ # buildkit206 B
87COPY environment.yaml /home/epi2melabs/environment.yaml # buildkit343 B
88RUN |6 ENVFILE=environment.yaml ROOT_INIT_SCRIPT=root_init_script.sh BEFORE_SCRIPT=before_script.sh493.48 MB
89USER 10000 B
90WORKDIR /home/epi2melabs32 B

Command

 ARG RELEASE