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poldracklab/fmriprep:1.5.10

Manifest digest

sha256:ead3d7451d32905cedae1667edee8757c20ff00b215047b4d7e3acea9885bbb7

OS/ARCH

linux/amd64

Compressed size

4.91 GB

Last pushed

over 6 years by bidsappsdev

Type

Image

Manifest digest

sha256:ead3d7451d32905cedae1667edee8757c20ff00b215047b4d7e3acea9885bbb7

Image Layers

Image Layers

1ADD file ... in / 49.12 MB
2/bin/sh -c set -xe &&814 B
3/bin/sh -c rm -rf /var/lib/apt/lists/*513 B
4/bin/sh -c sed -i 's/^#\s*\(deb.*universe\)$/\1/g'675 B
5/bin/sh -c mkdir -p /run/systemd164 B
6CMD ["/bin/bash"]0 B
7COPY file:d5eff1f298d04030bccddfe5554b88df2b680f300fbe52af4aa3aad736ab5b9b in /usr/local/etc/neurodebian.gpg 3.32 KB
8/bin/sh -c apt-get update &&154.87 MB
9/bin/sh -c curl -o pandoc-2.2.2.1-1-amd64.deb25.08 MB
10/bin/sh -c curl -sSL https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/6.0.1/freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1.tar.gz2.76 GB
11ENV FSL_DIR=/usr/share/fsl/5.0 OS=Linux FS_OVERRIDE=00 B
12ENV SUBJECTS_DIR=/opt/freesurfer/subjects FUNCTIONALS_DIR=/opt/freesurfer/sessions MNI_DIR=/opt/freesurfer/mni0 B
13ENV PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.5 MNI_PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.5 PATH=/opt/freesurfer/bin:/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
14/bin/sh -c curl -sSL "http://neuro.debian.net/lists/$(16.72 KB
15/bin/sh -c apt-get update &&226.64 MB
16ENV FSLDIR=/usr/share/fsl/5.0 FSLOUTPUTTYPE=NIFTI_GZ FSLMULTIFILEQUIT=TRUE0 B
17ENV PATH=/usr/lib/fsl/5.0:/usr/lib/afni/bin:/opt/freesurfer/bin:/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
18ENV ANTSPATH=/usr/lib/ants0 B
19/bin/sh -c mkdir -p $ANTSPATH504.27 MB
20ENV PATH=/usr/lib/ants:/usr/lib/fsl/5.0:/usr/lib/afni/bin:/opt/freesurfer/bin:/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
21/bin/sh -c curl -sL https://deb.nodesource.com/setup_10.x31.9 MB
22/bin/sh -c apt-get install -y92 B
23/bin/sh -c npm install -g3.49 MB
24/bin/sh -c npm install -g23 MB
25/bin/sh -c mkdir -p /opt/ICA-AROMA183.96 KB
26ENV PATH=/opt/ICA-AROMA:/usr/lib/ants:/usr/lib/fsl/5.0:/usr/lib/afni/bin:/opt/freesurfer/bin:/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin AROMA_VERSION=0.4.50 B
27/bin/sh -c curl -sSLO https://repo.continuum.io/miniconda/Miniconda3-4.5.11-Linux-x86_64.sh147.45 MB
28ENV PATH=/usr/local/miniconda/bin:/opt/ICA-AROMA:/usr/lib/ants:/usr/lib/fsl/5.0:/usr/lib/afni/bin:/opt/freesurfer/bin:/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin CPATH=/usr/local/miniconda/include/: LANG=C.UTF-80 B
29/bin/sh -c conda install -y592.65 MB
30ENV MKL_NUM_THREADS=1 OMP_NUM_THREADS=10 B
31/bin/sh -c useradd -m -s4.43 KB
32WORKDIR /home/fmriprep0 B
33ENV HOME=/home/fmriprep0 B
34/bin/sh -c python -c "from17.58 KB
35COPY file:59a8c6adf8822eaa06343904dbe9a5bf769ad3357ec2598ee6a9e95993ada1f8 in fmriprep-setup.cfg 1.22 KB
36/bin/sh -c pip install --no-cache-dir150.37 MB
37COPY dir:c017451ce40d827212cdafbe61d202d5eae838647df6f0dbe9238baf55ae7704 in /src/fmriprep 22.51 MB
38ARG VERSION0 B
39|1 VERSION=1.5.10 /bin/sh -c echo126.84 MB
40|1 VERSION=1.5.10 /bin/sh -c install689 B
41|1 VERSION=1.5.10 /bin/sh -c find141.62 MB
42ENV IS_DOCKER_8395080871=10 B
43|1 VERSION=1.5.10 /bin/sh -c ldconfig12.96 KB
44WORKDIR /tmp/0 B
45ENTRYPOINT ["/usr/local/miniconda/bin/fmriprep"]0 B
46ARG BUILD_DATE0 B
47ARG VCS_REF0 B
48ARG VERSION0 B
49LABEL org.label-schema.build-date=2020-04-16T13:06:32Z org.label-schema.name=fMRIPrep org.label-schema.description=fMRIPrep0 B

Command

ADD file:7529d28035b43a2281b9ba1d3cf6bde4f0d9517693e9412328761d51c24091b4 in /